Pediatricians split from CDC in childhood vaccine recommendations


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Summary

American Academy of Pediatrics released its 2026 childhood vaccine schedule

AAP’s vaccine schedule is unchanged from last year’s version and recommends immunizations against 18 infectious diseases.

AAP vs CDC

Earlier this year, the Centers for Disease Control and Prevention overhauled its own vaccine schedule, nixing six vaccines for most U.S. children: hepatitis A, hepatitis B, meningococcal disease, rotavirus, COVID-19 and influenza.

Freedom of choice, poor health outcomes

On Friday, Kirk Milhoan, a pediatric cardiologist and chair of the Advisory Committee on Immunization Practices, acknowledged that some children might die or be paralyzed by polio if they are not vaccinated.


Full story

The American Academy of Pediatrics (AAP) on Monday released its 2026 childhood vaccine schedule. The guidance — endorsed by 12 other independent health organizations — is largely unchanged from last year’s version, but now diverges significantly from the updated immunization schedule announced this month by the Centers for Disease Control and Prevention (CDC).

AAP continues to recommend that all children receive vaccines against 18 infectious diseases, seven more than the CDC’s new guidance. Diseases included in the AAP schedule but not the CDC’s are hepatitis A, hepatitis B, rotavirus, COVID-19, influenza, meningococcal disease and respiratory syncytial virus (RSV).

“This is the exact same recommendation that we’ve had all along, the same recommendation the federal government used to agree with,” AAP President Andrew Racine said during a Monday press briefing. 

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“Nothing has changed. The science hasn’t changed. The distribution of these illnesses hasn’t changed. The risk to the children of the United States hasn’t changed, and so the vaccine schedule hasn’t changed,” he said. 

New CDC guidance

Since the second Trump administration began last year, federal health officials have amended national vaccine guidelines, sounded alarms about the alleged danger of vaccines and called for vaccine regulation reform.

When Robert F. Kennedy Jr. took the helm as Health and Human Services Secretary, he fired all 17 members of the Advisory Committee on Immunization Practices (ACIP), an independent group of physicians and public health officials that develops guidance about the use of vaccines in the country.

The newly constituted committee went on to change recommendations around the chickenpox vaccine — separating it from the measles, mumps, and rubella vaccine — and then to amend the longstanding practice of vaccinating all newborns against hepatitis B at birth.

Vinay Prasad, the director of the FDA’s Center for Biologics Evaluation and Research, reported in an internal memo circulated late last year that at least 10 children died after receiving the COVID-19 vaccine. The memo did not provide substantial details about the FDA’s investigation into vaccine deaths.

In early December, President Donald Trump signed an executive order directing Kennedy and the CDC to review vaccine recommendations from other developed countries and to amend the U.S. vaccine schedule to align with best practices. 

In early January, the CDC unveiled its new, 11-vaccine schedule.

The public health agency did not provide in-depth information about its review, and it is unclear whether ACIP was involved. However, in a public statement, the department said that the U.S. has recommended more childhood vaccine doses than any other peer country, even as trust in public health fell sharply and vaccination rates declined. 

The department called for additional randomized trials and studies for individual vaccines, combination shots and timing.

Physicians, public health experts and health organizations, including the AAP, immediately criticized the changes.

“Today’s announcement by federal health officials to arbitrarily stop recommending numerous routine childhood immunizations is dangerous and unnecessary,” the AAP said at the time.

The AAP and other independent physician groups reaffirmed that the vaccine schedule that pre-dated the Trump administration remains the most credible and evidence-based guidance.

“We need our patients and the public to understand that physicians and health care professionals consider vaccines among the most effective tools that we have for protecting health,” Bobby Mukkamala, the president of the American Medical Association (AMA), one of the health organizations that endorsed AAP’s schedule, said during a press conference on Monday.

“The science is clear, vaccines remain the best protection for keeping children and communities healthy,” Mukkamala continued. “That’s why the AMA is endorsing the American Academy of Pediatrics 2026 recommended child and adolescent immunization strategy. It reflects the best available science expert consensus and decades of real world data demonstrating the life saving impact of timely vaccination.”

HHS press secretary Emily Hilliard disagreed.

“AAP is angry that CDC eliminated corporate influence in vaccine recommendations by reconstituting the Advisory Committee on Immunization Practices with leading physicians and public health experts and by accepting recommendations from a comprehensive scientific review of U.S. childhood immunization practices conducted under President Trump’s order to examine international best practices in peer developed countries,” Hilliard told SAN Monday.

“The updated CDC childhood schedule continues to protect children against serious diseases while aligning U.S. guidance with international norms,” she continued. “Many peer nations achieve high vaccination rates without mandates by relying on trust, education and strong doctor-patient relationships, and HHS will work with states and clinicians to ensure families have clear, accurate information to make their own informed decisions.”

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Why this story matters

The divergence between the American Academy of Pediatrics and the Centers for Disease Control and Prevention over childhood vaccine recommendations marks a notable shift in public health policy, raising questions about scientific consensus, trust, and state-level implementation.

Vaccine policy divergence

The AAP's updated vaccine schedule no longer aligns with the CDC's, highlighting a break from decades of unified guidance and creating confusion among healthcare providers, parents, and states about which recommendations to follow.

Public trust and health guidance

Differing recommendations from major health authorities have generated uncertainty and concern among families and providers, impacting public trust in health institutions and the perceived credibility of vaccine guidance.

Political and scientific debate

The federal changes, attributed to new leadership and policy decisions rather than new scientific data, have intensified debate over the role of politics versus science in shaping vaccine recommendations and health policy.

SAN provides
Unbiased. Straight Facts.

Don’t just take our word for it.


Certified balanced reporting

According to media bias experts at AllSides

AllSides Certified Balanced May 2025

Transparent and credible

Awarded a perfect reliability rating from NewsGuard

100/100

Welcome back to trustworthy journalism.

Find out more

Media landscape

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Key points from the Left

  • The American Academy of Pediatrics released updated vaccine recommendations that include immunization against respiratory syncytial virus and maintain previous guidelines for other vaccines.
  • Twelve major medical organizations endorsed the AAP's recommendations as states increasingly choose to follow them instead of the CDC's new guidelines.
  • Pediatricians, including Dr. Sean O’Leary, reaffirm the importance of following the AAP's science-based guidelines to prevent vaccine-preventable diseases.
  • A significant divide on vaccination recommendations has emerged, with states led by Democrats rejecting CDC guidelines in favor of AAP recommendations.

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Key points from the Center

  • On Monday, the American Academy of Pediatrics released its 2026 childhood and adolescent immunization schedule, formally separating from the Centers for Disease Control and Prevention's revised federal guidance.
  • Federal changes to ACIP procedures and recommendations prompted the reorganization after HHS Secretary Robert F. Kennedy Jr. Disbanded and reconstituted ACIP in mid-2025, leading to the CDC's updated schedule.
  • Published in the AAP Red Book Online, the 2026 recommendations include COVID-19 immunization starting at six months and clesrovimab as an RSV option, backed by twelve major medical and health organizations.
  • States and clinicians are now following the AAP's guidance instead of the CDC's, with 28 states deviating from federal advice and clinicians warning this may confuse parents and reduce vaccine uptake.
  • The AAP and six other medical and public-health groups have sued to disband ACIP, while experts warn the CDC's downgrades could increase under-vaccination risks, and AAP leadership including Sean O'Leary emphasized "This is the standard of care."

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Key points from the Right

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